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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs58039701 chr8:11782256 CTT/C SGK223 chr8:8175258-8244008:- 0.36 6.61 1.02E-10 Box Plot
THCA rs58049869 chr8:11788495 C/T SGK223 chr8:8175258-8244008:- -0.45 -8.43 3.96E-16 Box Plot
THCA rs58053911 chr1:121239818 TG/T NBPF14 chr1:148003642-148025863:- 0.44 10.4 5.56E-23 Box Plot
THCA rs58060922 chr6:26895248 C/A ZFP57 chr6:29640169-29648887:- 0.78 7.71 7.26E-14 Box Plot
THCA rs58065098 chr6:151742917 G/T NEK5 chr13:52607747-52703214:- 0.58 6.66 7.33E-11 Box Plot
THCA rs58076938 chr7:140159942 G/C LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs5808026 chr14:39820172 TC/T LOC647288 chr13:75811890-75814517:- -0.42 -7.99 1.03E-14 Box Plot
THCA rs58093584 chr2:101153349 G/C LOC285359 chr3:101431278-101432259:+ 0.36 6.92 1.49E-11 Box Plot
THCA rs58100800 chr1:121187763 CT/C NBPF14 chr1:148003642-148025863:- 0.43 10.27 1.65E-22 Box Plot
THCA rs58145982 chr5:176742562 CA/C LOC388955 chr2:63849182-63850159:- 0.88 20.15 8.38E-66 Box Plot
THCA rs581807 chr11:77596773 G/A INTS4L1 chr7:64601603-64694600:+ 0.44 7.93 1.53E-14 Box Plot
THCA rs58186870 chr10:51812899 A/G FAM21B chr10:47894023-47949412:+ 0.56 7.31 1.11E-12 Box Plot
THCA rs58197452 chr14:66787702 A/T ATP6V1D chr14:67761088-67826982:- 0.43 7.63 1.28E-13 Box Plot
THCA rs58202536 chr8:11789521 T/A SGK223 chr8:8175258-8244008:- -0.45 -8.44 3.94E-16 Box Plot
THCA rs582582 chr11:77665894 C/G INTS4L1 chr7:64601603-64694600:+ 0.71 11.35 1.37E-26 Box Plot